At1g05310

Description : Probable pectinesterase 8 [Source:UniProtKB/Swiss-Prot;Acc:O23038]

Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g05310
Cluster	HCCA clusters: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15905	No alias	putative pectinesterase 8	0.02	Orthogroups_2024-Update
A4A49_38924	No alias	putative pectinesterase 53	0.03	Orthogroups_2024-Update
At5g07420	No alias	Probable pectinesterase 49...	0.03	Orthogroups_2024-Update
At5g55590	No alias	Pectinesterase QRT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM79]	0.03	Orthogroups_2024-Update
Brara.I05452.1	No alias	pectin methylesterase	0.03	Orthogroups_2024-Update
Glyma.01G006800	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os05g44600	No alias	pectinesterase, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00005566-RA	No alias	(at1g05310 : 423.0) Pectin lyase-like superfamily...	0.02	Orthogroups_2024-Update
PSME_00045931-RA	No alias	(at5g47500 : 448.0) Pectin lyase-like superfamily...	0.02	Orthogroups_2024-Update
Potri.018G068400	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Pp1s35_88V6	No alias	pectin methylesterase	0.03	Orthogroups_2024-Update
Sobic.008G131300.1	No alias	pectin methylesterase	0.03	Orthogroups_2024-Update
Solyc12g008530	No alias	Pectinesterase (AHRD V3.3 *** K4DBU1_SOLLC)	0.03	Orthogroups_2024-Update
Sopen07g033560	No alias	Pectinesterase	0.02	Orthogroups_2024-Update
Sopen12g003480	No alias	Pectinesterase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	92	384

External Links

No external refs found!