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  5. AC203173.3_FG004

AC203173.3_FG004


Description : Ribosomal protein S5/Elongation factor G/III/V family protein


Gene families : OG_42_0001704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC203173.3_FG004
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44160 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 Orthogroups_2024-Update
Brara.H01898.1 No alias mRNA-translocation factor *(eEF2)) 0.04 Orthogroups_2024-Update
HORVU7Hr1G106150.2 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Kfl00080_0090 kfl00080_0090_v1.1 (at1g56070 : 1415.0) encodes a translation elongation... 0.03 Orthogroups_2024-Update
Seita.5G313000.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Seita.J022400.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Sobic.001G021300.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Sobic.001G021400.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Sobic.003G291500.1 No alias mRNA-translocation factor *(eEF2)) 0.04 Orthogroups_2024-Update
evm.model.tig00021464.39 No alias (o23755|ef2_betvu : 1083.0) Elongation factor 2 (EF-2) -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000640 EFG_V-like 724 811
IPR004161 EFTu-like_2 394 467
IPR000795 TF_GTP-bd_dom 18 342
IPR005517 Transl_elong_EFG/EF2_IV 611 722
No external refs found!