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Description : Pentatricopeptide repeat-containing protein At1g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK1]
Gene families : OG_42_0008844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008844_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At1g05600 | |
| Cluster | HCCA clusters: Cluster_110 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Predicted GO |
| MF | GO:0004140 | dephospho-CoA kinase activity | IEP | Predicted GO |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0006887 | exocytosis | IEP | Predicted GO |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
| BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0019321 | pentose metabolic process | IEP | Predicted GO |
| BP | GO:0019566 | arabinose metabolic process | IEP | Predicted GO |
| BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | Predicted GO |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Predicted GO |
| BP | GO:0046903 | secretion | IEP | Predicted GO |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 300 | 329 |
| IPR002885 | Pentatricopeptide_repeat | 48 | 77 |
| IPR002885 | Pentatricopeptide_repeat | 442 | 469 |
| IPR002885 | Pentatricopeptide_repeat | 341 | 357 |
| IPR002885 | Pentatricopeptide_repeat | 84 | 112 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 250 |
| IPR002885 | Pentatricopeptide_repeat | 367 | 417 |
| IPR002885 | Pentatricopeptide_repeat | 154 | 198 |
| No external refs found! |