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  5. AC203909.3_FG007

AC203909.3_FG007


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC203909.3_FG007
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.03 Orthogroups_2024-Update
At1g11770 No alias Berberine bridge enzyme-like 2... 0.02 Orthogroups_2024-Update
At1g30710 No alias Berberine bridge enzyme-like 9... 0.03 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.A01131.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.05 Orthogroups_2024-Update
Brara.G00588.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Brara.G01552.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I02786.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
GRMZM2G124078 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G124900 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.05G125200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080500 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G020240.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
HORVU4Hr1G017270.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
PSME_00030437-RA No alias (at2g34810 : 230.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00033064-RA No alias (at4g20860 : 370.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.001G459200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G462800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G463300 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Solyc02g069690 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44400.1) 0.03 Orthogroups_2024-Update
Solyc02g070070 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1) 0.03 Orthogroups_2024-Update
Solyc02g079480 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1) 0.02 Orthogroups_2024-Update
Solyc03g006690 No alias LOW QUALITY:FAD-binding Berberine family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen02g018810 No alias FAD binding domain 0.03 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.02 Orthogroups_2024-Update
Sopen02g024290 No alias FAD binding domain 0.03 Orthogroups_2024-Update
Sopen03g002700 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 82 220
IPR012951 BBE 473 537
No external refs found!