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  5. AC204292.4_FG002

AC204292.4_FG002


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC204292.4_FG002
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Brara.H00716.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G074220.1 No alias RNA editing factor *(MEF21) 0.02 Orthogroups_2024-Update
HORVU3Hr1G073540.14 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G085150.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g41120 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G091900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G403500.3 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 84 131
IPR002885 Pentatricopeptide_repeat 222 268
IPR002885 Pentatricopeptide_repeat 357 404
IPR032867 DYW_dom 531 654
IPR002885 Pentatricopeptide_repeat 195 217
IPR002885 Pentatricopeptide_repeat 433 456
No external refs found!