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At1g05880


Description : Probable E3 ubiquitin-protein ligase ARI12 [Source:UniProtKB/Swiss-Prot;Acc:Q84RQ9]


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g05880
Cluster HCCA clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_35938 No alias putative e3 ubiquitin-protein ligase ari2 0.03 Orthogroups_2024-Update
At3g27710 No alias Probable E3 ubiquitin-protein ligase ARI3... 0.04 Orthogroups_2024-Update
Bradi1g14425 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g14430 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.J02403.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G068450.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00714_0020 kfl00714_0020_v1.1 (at1g65430 : 663.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Sobic.005G208700.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.005G210000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase & component... 0.02 Orthogroups_2024-Update
Sopen11g004370 No alias IBR domain 0.03 Orthogroups_2024-Update
evm.model.contig_4402.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 255 297
No external refs found!