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  5. At1g06140

At1g06140


Description : Pentatricopeptide repeat-containing protein At1g06140, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LND4]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g06140
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
107423 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
171135 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Orthogroups_2024-Update
94128 No alias pentatricopeptide (PPR) repeat-containing protein 0.08 Orthogroups_2024-Update
99677 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
A4A49_00959 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_26813 No alias putative pentatricopeptide repeat-containing protein,... 0.02 Orthogroups_2024-Update
A4A49_38131 No alias pentatricopeptide repeat-containing protein 0.02 Orthogroups_2024-Update
At1g17630 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Orthogroups_2024-Update
At1g20230 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.05 Orthogroups_2024-Update
At1g74600 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 Orthogroups_2024-Update
At2g27610 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Orthogroups_2024-Update
At4g30700 No alias MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] 0.04 Orthogroups_2024-Update
At4g35130 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.04 Orthogroups_2024-Update
Brara.A02809.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C03290.1 No alias RNA editing factor *(MEF12) 0.04 Orthogroups_2024-Update
Brara.E02827.1 No alias RNA editing factor *(MEF22) 0.04 Orthogroups_2024-Update
Brara.E02932.1 No alias RNA editing factor *(MEF10) 0.03 Orthogroups_2024-Update
Brara.F03378.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01226.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01750.1 No alias RNA editing factor *(SLO4) 0.03 Orthogroups_2024-Update
Brara.K00527.1 No alias RNA editing factor *(MEF29) 0.04 Orthogroups_2024-Update
Glyma.02G227300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.06 Orthogroups_2024-Update
Glyma.10G277600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G001100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G146900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G220450 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G161800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G117001 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G154600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G035630.4 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G074220.1 No alias RNA editing factor *(MEF21) 0.04 Orthogroups_2024-Update
HORVU3Hr1G023070.1 No alias RNA editing factor *(OTP81) 0.03 Orthogroups_2024-Update
HORVU3Hr1G023090.1 No alias RNA editing factor *(OTP81) 0.03 Orthogroups_2024-Update
HORVU6Hr1G010120.6 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G057130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G094640.60 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g15800 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g36620 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432704g0020 No alias (at4g18750 : 463.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
MA_110266g0010 No alias (at1g11290 : 558.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_11454g0010 No alias (at4g13650 : 676.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
MA_124868g0020 No alias (at4g13650 : 517.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
MA_127785g0010 No alias (at2g03880 : 512.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_13057g0010 No alias (at4g33170 : 800.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_16339g0010 No alias (at3g57430 : 548.0) Encodes a chloroplast RNA editing... 0.04 Orthogroups_2024-Update
MA_230261g0010 No alias (at4g13650 : 756.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_2473g0010 No alias (at3g12770 : 597.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_27726g0010 No alias (at1g15510 : 744.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_30949g0010 No alias (at3g57430 : 710.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
MA_31170g0010 No alias (at1g11290 : 681.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
MA_41676g0020 No alias (at3g24000 : 462.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_42343g0010 No alias (at4g02750 : 579.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
MA_42352g0010 No alias (at2g13600 : 487.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
MA_474261g0010 No alias (at3g12770 : 471.0) Encodes a pentatricopeptide repeat... 0.04 Orthogroups_2024-Update
MA_615077g0010 No alias (at3g12770 : 607.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_68707g0010 No alias (at3g24000 : 546.0) Tetratricopeptide repeat (TPR)-like... 0.06 Orthogroups_2024-Update
MA_771696g0010 No alias (at1g20230 : 490.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_79738g0010 No alias (at3g13770 : 512.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
MA_97789g0010 No alias (at3g26540 : 452.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
PSME_00025402-RA No alias (at3g02010 : 629.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00036565-RA No alias (at4g18750 : 575.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
Potri.002G155100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.007G068900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G191200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G147900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G213100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G277100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g032860 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen01g054250 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen04g022860 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen06g024560 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen07g001950 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g024580 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 176 205
IPR002885 Pentatricopeptide_repeat 452 476
IPR002885 Pentatricopeptide_repeat 251 271
IPR002885 Pentatricopeptide_repeat 377 424
IPR002885 Pentatricopeptide_repeat 276 319
No external refs found!