Description : Rho termination factor [Source:TAIR;Acc:AT1G06190]
Gene families : OG_42_0006050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At1g06190 | |
Cluster | HCCA clusters: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi3g54807 | No alias | Rho termination factor | 0.04 | Orthogroups_2024-Update | |
Brara.C01592.1 | No alias | plastidial DNA | 0.04 | Orthogroups_2024-Update | |
GRMZM2G168335 | No alias | Rho termination factor | 0.03 | Orthogroups_2024-Update | |
Sobic.004G338300.3 | No alias | plastidial DNA | 0.03 | Orthogroups_2024-Update | |
Solyc09g025260 | No alias | SAP-like protein BP-73 (AHRD V3.3 *** W9QWA9_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Sopen09g028260 | No alias | Rho termination factor, N-terminal domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006353 | DNA-templated transcription, termination | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predicted GO |
MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
MF | GO:0004629 | phospholipase C activity | IEP | Predicted GO |
MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011112 | Rho_N | 363 | 394 |
No external refs found! |