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  5. At1g06260

At1g06260


Description : Cysteine proteinases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LNC1]


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g06260
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
78186 No alias xylem cysteine peptidase 2 0.02 Orthogroups_2024-Update
78855 No alias xylem cysteine peptidase 2 0.02 Orthogroups_2024-Update
A4A49_16637 No alias cysteine protease xcp2 0.03 Orthogroups_2024-Update
Bradi3g53300 No alias xylem cysteine peptidase 1 0.02 Orthogroups_2024-Update
Brara.E02264.1 No alias C1-class subclass RD21/XCP thiol protease & EC_3.4... 0.03 Orthogroups_2024-Update
GRMZM2G006377 No alias xylem bark cysteine peptidase 3 0.02 Orthogroups_2024-Update
LOC_Os04g57490 No alias cysteine protease, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00009971-RA No alias (o65039|cysep_ricco : 395.0) Vignain precursor (EC... 0.03 Orthogroups_2024-Update
PSME_00016674-RA No alias (at3g19390 : 322.0) Granulin repeat cysteine protease... 0.03 Orthogroups_2024-Update
Sobic.009G190600.1 No alias C1-class subclass XBCP3 cysteine protease & EC_3.4... 0.03 Orthogroups_2024-Update
Solyc04g080880 No alias Cysteine protease family protein (AHRD V3.3 *** B9H4H0_POPTR) 0.03 Orthogroups_2024-Update
Sopen04g034460 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update
Sopen12g030570 No alias Papain family cysteine protease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008234 cysteine-type peptidase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 127 341
IPR013201 Prot_inhib_I29 43 99
No external refs found!