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  5. AC209718.1_FG009

AC209718.1_FG009


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC209718.1_FG009
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
At1g05750 No alias Pentatricopeptide repeat-containing protein At1g05750,... 0.03 Orthogroups_2024-Update
At3g47530 No alias Pentatricopeptide repeat-containing protein At3g47530... 0.04 Orthogroups_2024-Update
At5g03800 No alias Glycosyltransferase (Fragment)... 0.02 Orthogroups_2024-Update
HORVU3Hr1G019130.5 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_49545g0010 No alias (at1g11290 : 523.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_778985g0010 No alias (at2g27610 : 621.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00048724-RA No alias (at3g49170 : 353.0) embryo defective 2261 (EMB2261);... 0.03 Orthogroups_2024-Update
PSME_00054674-RA No alias (at4g33170 : 289.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 413 460
IPR002885 Pentatricopeptide_repeat 135 180
IPR002885 Pentatricopeptide_repeat 311 358
IPR002885 Pentatricopeptide_repeat 277 306
IPR002885 Pentatricopeptide_repeat 248 267
IPR002885 Pentatricopeptide_repeat 487 512
No external refs found!