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  5. AC210013.4_FG019

AC210013.4_FG019


Description : Ribosomal protein S5 family protein


Gene families : OG_42_0002117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC210013.4_FG019
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
67484 No alias Ribosomal protein S5 family protein 0.12 Orthogroups_2024-Update
A4A49_17312 No alias 40s ribosomal protein s2-4 0.08 Orthogroups_2024-Update
At1g58380 No alias At1g59359 [Source:UniProtKB/TrEMBL;Acc:G1JSI6] 0.03 Orthogroups_2024-Update
At3g57490 No alias 40S ribosomal protein S2-4... 0.04 Orthogroups_2024-Update
Bradi1g04660 No alias Ribosomal protein S5 family protein 0.09 Orthogroups_2024-Update
Bradi1g54270 No alias Ribosomal protein S5 family protein 0.09 Orthogroups_2024-Update
Brara.A02366.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.C02137.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
Brara.E00249.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Cre01.g039250 No alias Ribosomal protein S5 family protein 0.02 Orthogroups_2024-Update
Glyma.02G085300 No alias Ribosomal protein S5 family protein 0.15 Orthogroups_2024-Update
Glyma.05G239000 No alias Ribosomal protein S5 family protein 0.07 Orthogroups_2024-Update
HORVU3Hr1G086050.2 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
HORVU5Hr1G109910.2 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Mp5g05010.1 No alias component RPS2 of SSU proteome 0.07 Orthogroups_2024-Update
Mp5g15970.1 No alias component RPS2 of SSU proteome 0.05 Orthogroups_2024-Update
Potri.006G052400 No alias Ribosomal protein S5 family protein 0.1 Orthogroups_2024-Update
Pp1s10_190V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s274_5V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s400_15V6 No alias 40s ribosomal protein 0.12 Orthogroups_2024-Update
Seita.2G079700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Seita.9G044700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Sobic.001G046100.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.15 Orthogroups_2024-Update
Sobic.001G046300.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.18 Orthogroups_2024-Update
Solyc04g063290 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.16 Orthogroups_2024-Update
Solyc04g074300 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.14 Orthogroups_2024-Update
Sopen04g026210 No alias Ribosomal protein S5, N-terminal domain 0.12 Orthogroups_2024-Update
Sopen04g029430 No alias Ribosomal protein S5, N-terminal domain 0.13 Orthogroups_2024-Update
evm.model.contig_4442.1 No alias (at1g58684 : 326.0) Ribosomal protein S5 family protein;... 0.23 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 85 149
IPR005324 Ribosomal_S5_C 168 234
No external refs found!