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  5. At1g07820

At1g07820


Description : Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g07820
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
A4A49_57227 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.02 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.03 Orthogroups_2024-Update
At3g45930 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
Brara.C01220.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.C01885.1 No alias histone *(H4) 0.07 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.06 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.1 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.I03658.1 No alias histone *(H4) 0.06 Orthogroups_2024-Update
Brara.I05338.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.03 Orthogroups_2024-Update
Cre16.g649950 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.05 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.05 Orthogroups_2024-Update
HORVU2Hr1G097990.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
MA_10428555g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.04 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Sobic.004G279601.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.05 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!