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  5. AC212570.3_FG006

AC212570.3_FG006


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_42_0006079 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC212570.3_FG006
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cre03.g196850 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Glyma.10G022600 No alias transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Mp4g00830.1 No alias SSU processome assembly factor (SWA1) 0.02 Orthogroups_2024-Update
Potri.014G135600 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Seita.7G244600.1 No alias SSU processome assembly factor *(SWA1) 0.05 Orthogroups_2024-Update
Sobic.007G137350.1 No alias SSU processome assembly factor *(SWA1) 0.06 Orthogroups_2024-Update
Solyc05g010480 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g006280 No alias UTP15 C terminal 0.04 Orthogroups_2024-Update
evm.model.contig_3524.8 No alias (at2g47990 : 220.0) Encodes a transducin family... 0.04 Orthogroups_2024-Update
evm.model.tig00020927.23 No alias (at2g47990 : 191.0) Encodes a transducin family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005730 nucleolus IEA InterProScan predictions
BP GO:0006364 rRNA processing IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018983 U3_snoRNA-assocProt_15_C 389 530
IPR001680 WD40_repeat 182 213
IPR001680 WD40_repeat 226 255
No external refs found!