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At1g08170


Description : Histone H2B.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGE3]


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g08170
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
At1g07790 No alias Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4] 0.03 Orthogroups_2024-Update
Glyma.12G065200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G005950.2 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU6Hr1G087190.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU7Hr1G110090.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Sobic.009G164200.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Solyc06g005390 No alias Histone H2B (AHRD V3.3 *** K4C323_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 89 214
No external refs found!