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  5. At1g08270

At1g08270


Description : CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G27600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 97 /.../gi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT1G08270]


Gene families : OG_42_0002387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g08270
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G010300.1 No alias ATPase component *(VPS4/SKD1) of VPS4-VTA1... 0.03 Orthogroups_2024-Update
LOC_Os02g06490 No alias vacuolar protein sorting-associated protein 4, putative,... 0.04 Orthogroups_2024-Update
Mp8g01610.1 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 Orthogroups_2024-Update
Solyc11g007170 No alias Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0007050 cell cycle arrest IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
CC GO:0032299 ribonuclease H2 complex IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR007330 MIT 2 38
No external refs found!