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At1g08560


Description : SYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g08560
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
130326 No alias syntaxin of plants 124 0.05 Orthogroups_2024-Update
A4A49_06568 No alias syntaxin-related protein knolle 0.04 Orthogroups_2024-Update
Brara.F00536.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.06 Orthogroups_2024-Update
Brara.H02867.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.09 Orthogroups_2024-Update
Glyma.02G069700 No alias syntaxin of plants 111 0.06 Orthogroups_2024-Update
Glyma.16G151200 No alias syntaxin of plants 111 0.03 Orthogroups_2024-Update
Solyc06g053760 No alias Syntaxin, putative (AHRD V3.3 *** B9SHK3_RICCO) 0.1 Orthogroups_2024-Update
Sopen06g018880 No alias SNARE domain 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 248 300
IPR006011 Syntaxin_N 45 247
No external refs found!