At1g08960

Description : CCX5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U3]

Gene families : OG_42_0000842 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g08960
Cluster	HCCA clusters: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method	Actions
At5g17850	No alias	Cation/calcium exchanger 2...	0.03	Orthogroups_2024-Update
Sopen02g014000	No alias	Sodium/calcium exchanger protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006788	heme oxidation	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0042168	heme metabolic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004837	NaCa_Exmemb	389	539
IPR004837	NaCa_Exmemb	97	238

External Links

No external refs found!