At1g09790

Description : COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500]

Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g09790
Cluster	HCCA clusters: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g59880	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.04	Orthogroups_2024-Update
Brara.C00685.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	Orthogroups_2024-Update
Glyma.08G249800	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Orthogroups_2024-Update
HORVU2Hr1G033070.19	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	Orthogroups_2024-Update
HORVU3Hr1G007580.3	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	Orthogroups_2024-Update
HORVU5Hr1G025760.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	Orthogroups_2024-Update
Potri.015G060100	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Orthogroups_2024-Update
Potri.015G060200	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Orthogroups_2024-Update
Solyc01g103860	No alias	COBRA-like protein (AHRD V3.3 *** L0AST8_POPTO)	0.04	Orthogroups_2024-Update
Solyc02g089130	No alias	COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	InterProScan predictions
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IEA	InterProScan predictions
BP	GO:0030198	extracellular matrix organization	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	InterProScan predictions
BP	GO:0040007	growth	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	60	222

External Links

No external refs found!