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  5. AC234190.1_FG001

AC234190.1_FG001


Description : expansin A17


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC234190.1_FG001
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
90332 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
At1g69530 No alias AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241] 0.02 Orthogroups_2024-Update
At3g29030 No alias At3g29030 [Source:UniProtKB/TrEMBL;Acc:Q1ECM3] 0.04 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.03 Orthogroups_2024-Update
Glyma.06G143300 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.09G236200 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.14G203900 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.18G044100 No alias expansin A13 0.03 Orthogroups_2024-Update
Glyma.18G054000 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.18G181700 No alias expansin A4 0.04 Orthogroups_2024-Update
Kfl00557_g9 kfl00557_g9_v1.1 (at1g12560 : 146.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
LOC_Os03g21820 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_37884g0010 No alias (q40636|expa2_orysa : 400.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
Mp3g03880.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00011353-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.02 Orthogroups_2024-Update
Sopen04g035500 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 159 236
IPR009009 RlpA-like_DPBB 63 148
No external refs found!