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  5. AC235534.1_FG007

AC235534.1_FG007


Description : homeodomain GLABROUS 1


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC235534.1_FG007
Cluster HCCA clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Brara.F03589.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G02319.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G126646 No alias homeodomain GLABROUS 11 0.02 Orthogroups_2024-Update
Glyma.05G248800 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
LOC_Os10g42490 No alias homeobox and START domains containing protein, putative,... 0.03 Orthogroups_2024-Update
Seita.8G063700.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 137 191
IPR002913 START_lipid-bd_dom 363 604
No external refs found!