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  5. GRMZM2G001327

GRMZM2G001327


Description : GTP binding Elongation factor Tu family protein


Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G001327
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
169717 No alias GTP binding Elongation factor Tu family protein 0.06 Orthogroups_2024-Update
171512 No alias GTP binding Elongation factor Tu family protein 0.07 Orthogroups_2024-Update
270693 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
At5g60390 No alias Elongation factor 1-alpha 4... 0.02 Orthogroups_2024-Update
Bradi0012s00100 No alias GTP binding Elongation factor Tu family protein 0.11 Orthogroups_2024-Update
Bradi1g06851 No alias GTP binding Elongation factor Tu family protein 0.11 Orthogroups_2024-Update
Bradi1g06861 No alias GTP binding Elongation factor Tu family protein 0.09 Orthogroups_2024-Update
Bradi1g06870 No alias GTP binding Elongation factor Tu family protein 0.11 Orthogroups_2024-Update
Bradi1g65725 No alias GTP binding Elongation factor Tu family protein 0.08 Orthogroups_2024-Update
Brara.B01038.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.09 Orthogroups_2024-Update
Brara.B01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.08 Orthogroups_2024-Update
Brara.C01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.09 Orthogroups_2024-Update
Brara.E01218.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
Brara.H02895.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
Brara.I05331.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
Brara.J01398.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
Glyma.05G089000 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
Glyma.05G114900 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G017020.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.05 Orthogroups_2024-Update
HORVU4Hr1G056740.5 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
HORVU5Hr1G100200.3 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
HORVU5Hr1G100700.3 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
MA_9512579g0020 No alias (p25698|ef1a_soybn : 118.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 Orthogroups_2024-Update
Pp1s59_161V6 No alias elongation factor 1- 0.03 Orthogroups_2024-Update
Pp1s59_181V6 No alias elongation factor 1- 0.05 Orthogroups_2024-Update
Seita.3G265400.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Seita.3G265700.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.07 Orthogroups_2024-Update
Seita.9G442900.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.07 Orthogroups_2024-Update
Seita.9G443000.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.07 Orthogroups_2024-Update
Sobic.010G182100.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.13 Orthogroups_2024-Update
Sobic.010G182200.2 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
Sobic.010G182300.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.13 Orthogroups_2024-Update
Sobic.010G182600.4 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.12 Orthogroups_2024-Update
Solyc06g005060 No alias elongation factor 1-alpha 0.08 Orthogroups_2024-Update
Sopen06g004650 No alias Elongation factor Tu GTP binding domain 0.15 Orthogroups_2024-Update
Sopen11g027830 No alias Elongation factor Tu GTP binding domain 0.12 Orthogroups_2024-Update
evm.model.contig_509.2 No alias (p25698|ef1a_soybn : 335.0) Elongation factor 1-alpha... 0.16 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 5 223
IPR004161 EFTu-like_2 248 313
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
No external refs found!