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  5. GRMZM2G001850

GRMZM2G001850


Description : nucleolin like 2


Gene families : OG_42_0002553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G001850
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
234317 No alias nucleolin like 2 0.02 Orthogroups_2024-Update
At1g48920 No alias Nucleolin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ1] 0.03 Orthogroups_2024-Update
Bradi3g14907 No alias nucleolin like 2 0.07 Orthogroups_2024-Update
Brara.E01715.1 No alias regulatory protein *(NCL) of rRNA transcription 0.04 Orthogroups_2024-Update
Brara.H00330.1 No alias regulatory protein *(NCL) of rRNA transcription 0.03 Orthogroups_2024-Update
Glyma.11G101500 No alias nucleolin like 2 0.02 Orthogroups_2024-Update
Glyma.12G027400 No alias nucleolin like 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G103520.7 No alias regulatory protein *(NCL) of rRNA transcription 0.07 Orthogroups_2024-Update
HORVU7Hr1G068630.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00563_0110 kfl00563_0110_v1.... (at1g48920 : 147.0) Encodes ATNUC-L1 (NUCLEOLIN LIKE 1),... 0.02 Orthogroups_2024-Update
PSME_00002216-RA No alias (at1g48920 : 154.0) Encodes ATNUC-L1 (NUCLEOLIN LIKE 1),... 0.02 Orthogroups_2024-Update
Potri.005G093100 No alias nucleolin like 2 0.04 Orthogroups_2024-Update
Potri.007G071100 No alias nucleolin like 2 0.04 Orthogroups_2024-Update
Seita.6G035600.1 No alias regulatory protein *(NCL) of rRNA transcription 0.08 Orthogroups_2024-Update
Seita.9G227300.1 No alias regulatory protein *(NCL) of rRNA transcription 0.07 Orthogroups_2024-Update
Sobic.001G224200.1 No alias regulatory protein *(NCL) of rRNA transcription 0.06 Orthogroups_2024-Update
Sobic.007G069700.1 No alias regulatory protein *(NCL) of rRNA transcription 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 55 110
No external refs found!