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  5. GRMZM2G002805

GRMZM2G002805


Description : C2H2-type zinc finger family protein


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G002805
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
A4A49_01661 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
A4A49_15164 No alias zinc finger protein zat5 0.03 Orthogroups_2024-Update
A4A49_40512 No alias zinc finger protein zat10 0.02 Orthogroups_2024-Update
At2g28200 No alias Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4] 0.02 Orthogroups_2024-Update
At3g19580 No alias ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97] 0.03 Orthogroups_2024-Update
Brara.A02870.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.C01069.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Brara.G01355.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G112251 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G113860 No alias zinc-finger protein 2 0.02 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.03G186100 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.18G287200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os04g08060 No alias ZOS4-03 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_109421g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_19127g0010 No alias (at1g02040 : 100.0) C2H2-type zinc finger family... 0.05 Orthogroups_2024-Update
MA_858691g0010 No alias (at1g02040 : 88.2) C2H2-type zinc finger family protein;... 0.04 Orthogroups_2024-Update
MA_9316262g0010 No alias (at2g45120 : 86.3) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.002G119300 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Potri.009G166200 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.010G229400 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Seita.8G248000.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Seita.9G357400.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.06 Orthogroups_2024-Update
Sobic.001G079500.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G144500.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Solyc05g054660 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update
Sopen06g032200 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update
Sopen11g030730 No alias C2H2-type zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!