GRMZM2G002851


Description : Cysteinyl-tRNA synthetase, class Ia family protein


Gene families : OG_42_0001929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G002851
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Bradi4g37620 No alias Cysteinyl-tRNA synthetase, class Ia family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0004817 cysteine-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005737 cytoplasm IEA InterProScan predictions
BP GO:0006423 cysteinyl-tRNA aminoacylation IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR032678 tRNA-synt_1_cat_dom 96 385
IPR015273 Cys-tRNA-synt_Ia_DALR 429 495
No external refs found!