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  5. GRMZM2G004741

GRMZM2G004741


Description : global transcription factor group E4


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G004741
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Brara.E03635.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F02430.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
HORVU6Hr1G045030.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
HORVU6Hr1G045070.3 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Kfl00007_0370 kfl00007_0370_v1.... (at5g65630 : 94.0) This gene is predicted to encode a... 0.02 Orthogroups_2024-Update
MA_18020g0010 No alias (at1g06230 : 328.0) This gene is predicted to encode a... 0.02 Orthogroups_2024-Update
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Seita.1G016100.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
Solyc01g106280 No alias PSTVd RNA-biding protein 0.03 Orthogroups_2024-Update
Sopen02g036270 No alias Bromodomain 0.02 Orthogroups_2024-Update
Sopen12g005960 No alias Bromodomain 0.02 Orthogroups_2024-Update
evm.model.tig00000632.12 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 325 407
IPR027353 NET_dom 491 552
No external refs found!