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  5. GRMZM2G004997

GRMZM2G004997


Description : evolutionarily conserved C-terminal region 5


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G004997
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Bradi1g74560 No alias evolutionarily conserved C-terminal region 2 0.02 Orthogroups_2024-Update
Bradi4g02150 No alias evolutionarily conserved C-terminal region 2 0.02 Orthogroups_2024-Update
Brara.B02362.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
LOC_Os03g53670 No alias YT521-B-like family domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g44200 No alias ECT5, putative, expressed 0.03 Orthogroups_2024-Update
Sopen01g045890 No alias YT521-B-like domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 354 491
No external refs found!