1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G005298

GRMZM2G005298


Description : Alpha amylase family protein


Gene families : OG_42_0001294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G005298
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cre10.g444700 No alias starch branching enzyme 2.2 0.01 Orthogroups_2024-Update
HORVU0Hr1G022790.5 No alias EC_2.4 glycosyltransferase & starch branching enzyme 0.03 Orthogroups_2024-Update
evm.model.contig_2064.4 No alias (at2g36390 : 732.0) Encodes a starch branching enzyme... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0043169 cation binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 126 200
IPR006047 Glyco_hydro_13_cat_dom 428 502
IPR006048 A-amylase/branching_C 803 893
No external refs found!