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Description : ubiquitin 9
Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G005461 | |
| Cluster | HCCA clusters: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At4g02970 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Bradi1g67552 | No alias | polyubiquitin 10 | 0.02 | Orthogroups_2024-Update | |
| Brara.C02747.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G042100 | No alias | polyubiquitin 10 | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G103160.4 | No alias | UBQ ubiquitin-fold protein | 0.01 | Orthogroups_2024-Update | |
| HORVU7Hr1G103550.4 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g45400 | No alias | ubiquitin family protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_100402g0010 | No alias | (at4g02890 : 582.0) Polyubiquitin gene containing 4... | 0.03 | Orthogroups_2024-Update | |
| MA_13121g0010 | No alias | (at5g03240 : 264.0) encodes ubiquitin that is attached... | 0.02 | Orthogroups_2024-Update | |
| Potri.006G129600 | No alias | ubiquitin 4 | 0.03 | Orthogroups_2024-Update | |
| Potri.016G128000 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s129_28V6 | No alias | Putative polyubiquitin | 0.02 | Orthogroups_2024-Update | |
| Seita.1G078800.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
| Seita.3G398300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.6G137900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G036600.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G292500.1 | No alias | component *(eL40) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G050100.1 | No alias | UBQ ubiquitin-fold protein | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G273300.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G223600.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G239500.6 | No alias | UBQ ubiquitin-fold protein | 0.02 | Orthogroups_2024-Update | |
| Solyc11g005650 | No alias | Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
| BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
| BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000626 | Ubiquitin_dom | 88 | 159 |
| No external refs found! |