Solyc03g013600

Description : NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (AHRD V3.3 *** NU6C_SOLLC)

Gene families : OG_42_0004432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004432_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g013600
Cluster	HCCA clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g16595	No alias	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	0.02	Orthogroups_2024-Update
LOC_Os02g24574	No alias	NADPH-dependent oxidoreductase, putative	0.03	Orthogroups_2024-Update
Seita.J016600.1	No alias	component *(NdhG) of NDH membrane subcomplex M	0.03	Orthogroups_2024-Update
Solyc02g011770	No alias	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009579	thylakoid	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001457	NADH_UbQ/plastoQ_OxRdtase_su6	22	172

External Links

No external refs found!