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  5. GRMZM2G009070

GRMZM2G009070


Description : acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases


Gene families : OG_42_0005923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G009070
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Bradi3g32820 No alias acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.04 Orthogroups_2024-Update
Brara.I01248.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 Orthogroups_2024-Update
Glyma.08G015200 No alias acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.03 Orthogroups_2024-Update
Potri.001G103300 No alias acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.03 Orthogroups_2024-Update
Pp1s101_215V6 No alias udp-n-acetylmuramoylalanyl-d-glutamate-- -diaminopimelate ligase 0.02 Orthogroups_2024-Update
Seita.9G333200.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 Orthogroups_2024-Update
Sopen08g029470 No alias Mur ligase middle domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016874 ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 337 544
IPR004101 Mur_ligase_C 565 648
No external refs found!