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  5. GRMZM2G012041

GRMZM2G012041


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_42_0005874 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G012041
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Bradi1g30260 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.09 Orthogroups_2024-Update
Glyma.13G034600 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
MA_140138g0020 No alias (at1g21580 : 407.0) Zinc finger C-x8-C-x5-C-x3-H type... 0.02 Orthogroups_2024-Update
Potri.002G077700 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 Orthogroups_2024-Update
Potri.005G182900 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 Orthogroups_2024-Update
Sobic.010G201500.4 No alias component *(SOP1) of PAXT RNA-exosome-activation complex 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!