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  5. GRMZM2G012453

GRMZM2G012453


Description : ATP-dependent RNA helicase, putative


Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G012453
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
76120 No alias RNA helicase family protein 0.03 Orthogroups_2024-Update
A4A49_11921 No alias putative pre-mrna-splicing factor atp-dependent rna... 0.03 Orthogroups_2024-Update
Cre08.g358563 No alias ATP-dependent RNA helicase, putative 0.02 Orthogroups_2024-Update
LOC_Os11g20554 No alias ATP-dependent RNA helicase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.4G158300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen12g030910 No alias Helicase associated domain (HA2) 0.04 Orthogroups_2024-Update
evm.model.tig00000984.27 No alias (at1g32490 : 711.0) Encodes a homolog of the yeast PRP2... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 707 838
IPR007502 Helicase-assoc_dom 900 988
IPR003029 S1_domain 205 269
IPR011709 DUF1605 1047 1121
IPR011545 DEAD/DEAH_box_helicase_dom 514 664
No external refs found!