GRMZM2G013519

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_42_0000934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G013519
Cluster	HCCA clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
Glyma.10G264500	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.02	Orthogroups_2024-Update
MA_65477g0010	No alias	(at3g62470 : 535.0) Pentatricopeptide repeat (PPR)...	0.03	Orthogroups_2024-Update
Seita.1G293600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Predicted GO
MF	GO:0004366	glycerol-3-phosphate O-acyltransferase activity	IEP	Predicted GO
CC	GO:0005730	nucleolus	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	138	194
IPR002885	Pentatricopeptide_repeat	287	319
IPR002885	Pentatricopeptide_repeat	83	111
IPR002885	Pentatricopeptide_repeat	223	252
IPR002885	Pentatricopeptide_repeat	328	356

External Links

No external refs found!