1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G014400

GRMZM2G014400


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G014400
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_05017 No alias heterogeneous nuclear ribonucleoprotein 1 0.03 Orthogroups_2024-Update
A4A49_26878 No alias rna-binding protein 1 0.03 Orthogroups_2024-Update
A4A49_33533 No alias heterogeneous nuclear ribonucleoprotein 1 0.03 Orthogroups_2024-Update
At2g33410 No alias Putative RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:O22791] 0.04 Orthogroups_2024-Update
Brara.I01999.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G050218 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
GRMZM2G104481 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Glyma.02G306700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Glyma.18G081700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
LOC_Os02g12850 No alias RNA recognition motif containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00011842-RA No alias (at3g07810 : 291.0) RNA-binding (RRM/RBD/RNP motifs)... 0.04 Orthogroups_2024-Update
Sobic.001G075800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g090520 No alias RNA-binding protein-like (AHRD V3.3 *-* Q8L779_ARATH) 0.02 Orthogroups_2024-Update
Sopen03g040520 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen11g007210 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 107 173
IPR000504 RRM_dom 8 63
No external refs found!