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Description : Nucleic acid-binding proteins superfamily
Gene families : OG_42_0008367 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008367_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G016084 | |
| Cluster | HCCA clusters: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g148950 | No alias | Nucleic acid-binding proteins superfamily | 0.01 | Orthogroups_2024-Update | |
| Mp6g19820.1 | No alias | 30S ribosomal protein S1, chloroplastic OS=Spinacia... | 0.02 | Orthogroups_2024-Update | |
| Seita.9G014000.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Sobic.001G015200.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Solyc09g097910 | No alias | 30S ribosomal protein S1 (AHRD V3.3 *** W9RML0_9ROSA) | 0.04 | Orthogroups_2024-Update | |
| Sopen09g035850 | No alias | S1 RNA binding domain | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Predicted GO |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Predicted GO |
| MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
| BP | GO:0006094 | gluconeogenesis | IEP | Predicted GO |
| BP | GO:0006570 | tyrosine metabolic process | IEP | Predicted GO |
| BP | GO:0006571 | tyrosine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Predicted GO |
| MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003029 | S1_domain | 174 | 250 |
| No external refs found! |