GRMZM2G017197

Description : pentatricopeptide (PPR) repeat-containing protein

Gene families : OG_42_0011308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011308_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G017197
Cluster	HCCA clusters: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sobic.006G192600.1	No alias	Unknown function	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004645	phosphorylase activity	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
MF	GO:0008184	glycogen phosphorylase activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	563	583
IPR002885	Pentatricopeptide_repeat	329	354
IPR002885	Pentatricopeptide_repeat	663	688
IPR002885	Pentatricopeptide_repeat	124	152
IPR002885	Pentatricopeptide_repeat	357	383
IPR002885	Pentatricopeptide_repeat	429	457
IPR002885	Pentatricopeptide_repeat	486	535
IPR002885	Pentatricopeptide_repeat	254	302
IPR002885	Pentatricopeptide_repeat	588	636
IPR032867	DYW_dom	762	874
IPR002885	Pentatricopeptide_repeat	88	117

External Links

No external refs found!