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  5. GRMZM2G018974

GRMZM2G018974


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G018974
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G014030.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 679 708
IPR002885 Pentatricopeptide_repeat 505 527
IPR002885 Pentatricopeptide_repeat 117 145
IPR002885 Pentatricopeptide_repeat 295 323
IPR002885 Pentatricopeptide_repeat 431 480
IPR002885 Pentatricopeptide_repeat 149 198
IPR002885 Pentatricopeptide_repeat 326 374
IPR002885 Pentatricopeptide_repeat 606 655
IPR002885 Pentatricopeptide_repeat 221 270
IPR002885 Pentatricopeptide_repeat 536 585
IPR002885 Pentatricopeptide_repeat 392 425
No external refs found!