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  5. GRMZM2G019571

GRMZM2G019571


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0008989 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G019571
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
PSME_00027812-RA No alias (at3g62470 : 119.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00051804-RA No alias (at5g14820 : 171.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 233 258
IPR002885 Pentatricopeptide_repeat 274 293
IPR002885 Pentatricopeptide_repeat 303 329
IPR002885 Pentatricopeptide_repeat 367 408
No external refs found!