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  5. GRMZM2G021864

GRMZM2G021864


Description : compromised recognition of TCV 1


Gene families : OG_42_0000757 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G021864
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Bradi3g22750 No alias compromised recognition of TCV 1 0.03 Orthogroups_2024-Update
Bradi5g04777 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.03 Orthogroups_2024-Update
Kfl00067_0050 kfl00067_0050_v1.1 (at4g24970 : 520.0) Histidine kinase-, DNA gyrase B-,... 0.02 Orthogroups_2024-Update
Mp1g01480.1 No alias MORC-type auxiliary factor of DNA methylation pathway 0.02 Orthogroups_2024-Update
Solyc02g084700 No alias MORC family CW-type zinc finger protein 4 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g028280 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006784 heme a biosynthetic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046160 heme a metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!