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  5. GRMZM2G022213

GRMZM2G022213


Description : C2H2-like zinc finger protein


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G022213
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
A4A49_23823 No alias zinc finger protein magpie 0.02 Orthogroups_2024-Update
A4A49_27071 No alias protein indeterminate-domain 9 0.02 Orthogroups_2024-Update
At1g03840 No alias Uncharacterized protein At1g03840 (Fragment)... 0.03 Orthogroups_2024-Update
Bradi1g18370 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Bradi3g26910 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
MA_10436688g0010 No alias (at1g68130 : 189.0) indeterminate(ID)-domain 14 (IDD14);... 0.03 Orthogroups_2024-Update
Sobic.001G242900.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G180900.2 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc07g053570 No alias Zinc finger family protein (AHRD V3.3 *** U5FMI7_POPTR) 0.03 Orthogroups_2024-Update
Sopen06g031640 No alias Zinc finger, C2H2 type 0.04 Orthogroups_2024-Update
evm.model.contig_435.15 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 60 82
No external refs found!