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  5. At1g13370

At1g13370


Description : Histone H3-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX60]


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g13370
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
At1g75600 No alias Histone H3-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR02] 0.03 Orthogroups_2024-Update
Glyma.17G176600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G020050.3 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU1Hr1G020070.2 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU1Hr1G058450.2 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU1Hr1G074340.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
PSME_00037347-RA No alias (at5g10980 : 103.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!