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  5. GRMZM2G022787

GRMZM2G022787


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_42_0008876 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008876_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G022787
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
MA_201242g0020 No alias (at3g16010 : 627.0) Pentatricopeptide repeat (PPR-like)... 0.04 Orthogroups_2024-Update
Sopen12g022350 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008156 negative regulation of DNA replication IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048478 replication fork protection IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051053 negative regulation of DNA metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1215 1247
IPR002885 Pentatricopeptide_repeat 1468 1497
IPR002885 Pentatricopeptide_repeat 1433 1460
IPR002885 Pentatricopeptide_repeat 1186 1214
IPR002885 Pentatricopeptide_repeat 1257 1283
IPR002885 Pentatricopeptide_repeat 1328 1355
IPR002885 Pentatricopeptide_repeat 1358 1408
IPR002885 Pentatricopeptide_repeat 1499 1548
IPR002885 Pentatricopeptide_repeat 1288 1325
IPR002885 Pentatricopeptide_repeat 1569 1615
No external refs found!