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At1g13630


Description : Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G13630]


Gene families : OG_42_0009618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g13630
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G165963 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G217900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 435 463
IPR002885 Pentatricopeptide_repeat 189 210
IPR002885 Pentatricopeptide_repeat 306 338
IPR002885 Pentatricopeptide_repeat 366 410
IPR002885 Pentatricopeptide_repeat 691 737
IPR002885 Pentatricopeptide_repeat 618 666
IPR002885 Pentatricopeptide_repeat 536 585
IPR002885 Pentatricopeptide_repeat 467 515
IPR002885 Pentatricopeptide_repeat 220 268
No external refs found!