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Description : Ribosomal protein L6 family protein
Gene families : OG_42_0002426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G024647 | |
| Cluster | HCCA clusters: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 270686 | No alias | Ribosomal protein L6 family protein | 0.02 | Orthogroups_2024-Update | |
| At1g18540 | No alias | 60S ribosomal protein L6-1... | 0.06 | Orthogroups_2024-Update | |
| Bradi3g08900 | No alias | Ribosomal protein L6 family protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g47410 | No alias | Ribosomal protein L6 family protein | 0.04 | Orthogroups_2024-Update | |
| Brara.B02104.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Brara.H02417.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Brara.I04782.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
| Cre01.g011000 | No alias | Ribosomal protein L6 family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.05G184000 | No alias | Ribosomal protein L6 family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.05G184100 | No alias | Ribosomal protein L6 family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G141700 | No alias | Ribosomal protein L6 family protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.08G151900 | No alias | Ribosomal protein L6 family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G271300 | No alias | Ribosomal protein L6 family protein | 0.06 | Orthogroups_2024-Update | |
| HORVU6Hr1G041750.3 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G052600.3 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
| LOC_Os04g39700 | No alias | 60S ribosomal protein L6, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| MA_108607g0010 | No alias | (p34091|rl6_mescr : 343.0) 60S ribosomal protein L6... | 0.03 | Orthogroups_2024-Update | |
| PSME_00044973-RA | No alias | (p34091|rl6_mescr : 327.0) 60S ribosomal protein L6... | 0.04 | Orthogroups_2024-Update | |
| Potri.009G065800 | No alias | Ribosomal protein L6 family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s59_122V6 | No alias | 60s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G214900.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Seita.7G134600.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Sobic.004G198400.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Sobic.006G116700.1 | No alias | component *(eL6) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
| Solyc05g054070 | No alias | 60S ribosomal protein L6 (AHRD V3.3 *** RL6_MESCR) | 0.04 | Orthogroups_2024-Update | |
| Solyc11g012110 | No alias | 60S ribosomal protein L6 (AHRD V3.3 *** RL6_MESCR) | 0.08 | Orthogroups_2024-Update | |
| Sopen05g032560 | No alias | Ribosomal protein L6e | 0.05 | Orthogroups_2024-Update | |
| Sopen11g006900 | No alias | Ribosomal protein L6e | 0.05 | Orthogroups_2024-Update | |
| evm.model.contig_2016.11 | No alias | (p34091|rl6_mescr : 131.0) 60S ribosomal protein L6... | 0.07 | Orthogroups_2024-Update | |
| evm.model.tig00021127.127 | No alias | (at1g74050 : 196.0) Ribosomal protein L6 family protein;... | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
| CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
| CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
| BP | GO:0006412 | translation | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Predicted GO |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Predicted GO |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
| MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
| BP | GO:1901661 | quinone metabolic process | IEP | Predicted GO |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000915 | 60S_ribosomal_L6E | 112 | 219 |
| No external refs found! |