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  5. GRMZM2G025880

GRMZM2G025880


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G025880
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_32094 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
At2g47860 No alias Phototropic-responsive NPH3 family protein... 0.04 Orthogroups_2024-Update
Bradi3g47620 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi5g23307 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Brara.A00595.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
GRMZM5G812926 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G069800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.09G272500 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.14G102500 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G223000 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G053490.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.05 Orthogroups_2024-Update
PSME_00021708-RA No alias (at5g66560 : 98.6) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00038127-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s454_11V6 No alias transposon protein mutator sub-class 0.03 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G120000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G145300.3 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 186 461
No external refs found!