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  5. GRMZM2G028852

GRMZM2G028852


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G028852
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
78092 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
At2g03380 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.02 Orthogroups_2024-Update
At5g06540 No alias Pentatricopeptide repeat-containing protein At5g06540... 0.02 Orthogroups_2024-Update
Glyma.02G087100 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G107430.1 No alias RNA editing factor *(MEF10) 0.02 Orthogroups_2024-Update
LOC_Os02g07050 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00029429-RA No alias (at3g13770 : 552.0) Pentatricopeptide repeat (PPR)... 0.01 Orthogroups_2024-Update
Potri.006G164100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc01g049810 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen11g024580 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 294 343
IPR002885 Pentatricopeptide_repeat 197 243
IPR002885 Pentatricopeptide_repeat 98 119
IPR002885 Pentatricopeptide_repeat 69 89
No external refs found!