GRMZM2G029486

Description : RAB GTPase 11C

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G029486
Cluster	HCCA clusters: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g189250	No alias	RAB GTPase 11C	0.01	Orthogroups_2024-Update
GRMZM2G101938	No alias	RAB GTPase homolog A1D	0.02	Orthogroups_2024-Update
HORVU5Hr1G114250.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Potri.001G270100	No alias	RAB GTPase homolog A4D	0.03	Orthogroups_2024-Update
Seita.9G387600.1	No alias	A-class RAB GTPase	0.01	Orthogroups_2024-Update
Sobic.009G089700.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Sobic.010G163600.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Solyc01g103380	No alias	Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT)	0.02	Orthogroups_2024-Update
Sopen10g015820	No alias	Ras family	0.02	Orthogroups_2024-Update
evm.model.contig_435.23	No alias	(q39572\|yptc6_chlre : 307.0) Ras-related protein YPTC6 -...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Predicted GO
MF	GO:0004620	phospholipase activity	IEP	Predicted GO
MF	GO:0004629	phospholipase C activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predicted GO
CC	GO:0070876	SOSS complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	20	180

External Links

No external refs found!