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  5. GRMZM2G029850

GRMZM2G029850


Description : Homeodomain-like superfamily protein


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G029850
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_11843 No alias protein reveille 6 0.03 Orthogroups_2024-Update
At1g01520 No alias ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835] 0.04 Orthogroups_2024-Update
At3g09600 No alias Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] 0.06 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.05 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.05 Orthogroups_2024-Update
Bradi1g29680 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g51757 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g51960 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00704.1 No alias transcription factor *(REVEILLE) 0.05 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
Brara.C00761.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Brara.C01424.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Brara.J00041.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
Brara.J02851.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Cre12.g514400 No alias circadian clock associated 1 0.01 Orthogroups_2024-Update
GRMZM2G118693 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G421256 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.02G241000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G177300 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G066100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G048500 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G211643 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G136300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G210600 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G044200 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G031850.2 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
HORVU6Hr1G066000.2 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
HORVU7Hr1G001830.3 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
HORVU7Hr1G121210.4 No alias transcription factor *(REVEILLE) 0.05 Orthogroups_2024-Update
Kfl00255_0190 kfl00255_0190_v1.... (at1g01060 : 122.0) LHY encodes a myb-related putative... 0.03 Orthogroups_2024-Update
LOC_Os02g45670 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g46030 No alias MYB family transcription factor, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os06g01670 No alias myb-like DNA-binding domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_102199g0010 No alias (at1g01060 : 123.0) LHY encodes a myb-related putative... 0.02 Orthogroups_2024-Update
Potri.004G074300 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.015G030400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G083900 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.017G144800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s325_68V6 No alias lhy protein 0.02 Orthogroups_2024-Update
Seita.1G272700.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.05 Orthogroups_2024-Update
Seita.4G004600.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
Sobic.001G143100.2 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G004300.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.07 Orthogroups_2024-Update
Solyc01g095030 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc03g098320 No alias Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) 0.03 Orthogroups_2024-Update
Sopen02g011740 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g029070 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 41 84
No external refs found!