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  5. GRMZM2G029859

GRMZM2G029859


Description : dynamin-like protein 6


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G029859
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
123655 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_13653 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_38131 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
At3g15930 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
At3g25060 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At5g39680 No alias Pentatricopeptide repeat-containing protein At5g39680... 0.03 Orthogroups_2024-Update
Bradi5g27691 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G057176 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G163359 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G006200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G016600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G056450.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g26940 No alias vegetative storage protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g13830 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g58100 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g60200 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g02200 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g09370 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001035-RA No alias (at1g16480 : 699.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00006080-RA No alias (at4g13650 : 605.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00014882-RA No alias (at4g13650 : 307.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00021863-RA No alias (at2g22070 : 612.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
PSME_00026226-RA No alias (at3g46790 : 588.0) Encodes a member of a PCMP (plant... 0.03 Orthogroups_2024-Update
PSME_00037812-RA No alias (at4g13650 : 600.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00045505-RA No alias (at2g22070 : 613.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Potri.001G466066 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s169_110V6 No alias T12J13.14; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Seita.5G044700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G242100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G182501.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g081900 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen09g004550 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 63 110
IPR002885 Pentatricopeptide_repeat 473 520
IPR002885 Pentatricopeptide_repeat 165 209
IPR002885 Pentatricopeptide_repeat 371 419
IPR003130 GED 1189 1271
IPR000375 Dynamin_central 813 999
IPR002885 Pentatricopeptide_repeat 548 571
IPR002885 Pentatricopeptide_repeat 272 302
IPR002885 Pentatricopeptide_repeat 346 368
IPR032867 DYW_dom 646 770
No external refs found!