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  5. GRMZM2G030148

GRMZM2G030148


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G030148
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
115259 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
45004 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
89230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_23672 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
A4A49_32855 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
At1g14470 No alias Pentatricopeptide repeat-containing protein At1g14470... 0.04 Orthogroups_2024-Update
Bradi2g53450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Orthogroups_2024-Update
Bradi3g32220 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g41840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.D02088.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H00716.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01279.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.02G087100 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G203500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G068600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Glyma.08G213800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G277600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G150300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G172800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G154600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G082860.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G035300.1 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
HORVU3Hr1G061600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G065970.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g45840 No alias CRR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g68490 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g06880 No alias EMB2758, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g07050 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g43470 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g08660 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g39910 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os08g25280 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33700 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g36620 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_116442g0010 No alias (at2g27610 : 647.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
MA_615077g0010 No alias (at3g12770 : 607.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_668740g0020 No alias (at3g13770 : 627.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00001133-RA No alias (at2g03880 : 550.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00006211-RA No alias (at3g46790 : 145.0) Encodes a member of a PCMP (plant... 0.03 Orthogroups_2024-Update
PSME_00024326-RA No alias (at2g13600 : 445.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00052680-RA No alias (at3g46790 : 263.0) Encodes a member of a PCMP (plant... 0.02 Orthogroups_2024-Update
PSME_00057248-RA No alias (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
Potri.008G052200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G168800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Potri.016G065500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Pp1s162_103V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.03 Orthogroups_2024-Update
Seita.9G213100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G489500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc01g049810 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc03g119950 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g096680 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen11g024580 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 271 319
IPR002885 Pentatricopeptide_repeat 143 167
IPR002885 Pentatricopeptide_repeat 170 194
IPR002885 Pentatricopeptide_repeat 347 371
No external refs found!